ZNF655 - Coexpedia

Co-expressed
Genes

GeneSet Analysis
GO-BP

GeneSet Analysis
DO

* Co-expressed genes with ZNF655 are ranked by sum of their edges' LLS score.

Rank	Gene Symbol and Name	Score
1	FAM200A family with sequence similarity 200 member A	4.537
2	POLR2J polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa	3.575
3	PSMB8 proteasome subunit beta 8	3.158
4	SELM	3.006
5	TCF12 transcription factor 12	2.609
6	DCAF10 DDB1 and CUL4 associated factor 10	2.394
7	USP16 ubiquitin specific peptidase 16	2.363
8	IFITM3 interferon induced transmembrane protein 3	2.186
9	GKAP1 G kinase anchoring protein 1	2.102
10	CGGBP1 CGG triplet repeat binding protein 1	2.100
11	LMBRD2 LMBR1 domain containing 2	2.074
12	TIMP4 TIMP metallopeptidase inhibitor 4	2.073
13	SSX2IP synovial sarcoma, X breakpoint 2 interacting protein	2.035
14	SREK1IP1 SREK1-interacting protein 1	1.996
15	ZNF789 zinc finger protein 789	1.954
16	EIF4H eukaryotic translation initiation factor 4H	1.930
17	CALD1 caldesmon 1	1.845
18	PRMT6 protein arginine methyltransferase 6	1.814
19	CEP57 centrosomal protein 57kDa	1.812
20	GPBP1L1 GC-rich promoter binding protein 1-like 1	1.791
21	GPX8 glutathione peroxidase 8 (putative)	1.768
22	YTHDC2 YTH domain containing 2	1.765
23	WDR72 WD repeat domain 72	1.731
24	MVP major vault protein	1.730
25	ATM ATM serine/threonine kinase	1.715
26	PTRF polymerase I and transcript release factor	1.664
27	TBCK TBC1 domain containing kinase	1.648
28	CD40 CD40 molecule, TNF receptor superfamily member 5	1.639
29	FAM214A family with sequence similarity 214 member A	1.637
30	BUD31 BUD31 homolog	1.579
31	ATXN7L3B ataxin 7-like 3B	1.562
32	ELK3 ELK3, ETS-domain protein (SRF accessory protein 2)	1.551
33	TMEM248 transmembrane protein 248	1.513
34	RPL30 ribosomal protein L30	1.506
35	IGF2BP3 insulin like growth factor 2 mRNA binding protein 3	1.441
36	EPC1 enhancer of polycomb homolog 1 (Drosophila)	1.435
37	IFT57 intraflagellar transport 57	1.400
38	SLC25A43 solute carrier family 25 member 43	1.388
39	FXYD5 FXYD domain containing ion transport regulator 5	1.386
40	N4BP2L2 NEDD4 binding protein 2-like 2	1.352
41	TBRG1 transforming growth factor beta regulator 1	1.350
42	MUC1 mucin 1, cell surface associated	1.331
43	ZNF3 zinc finger protein 3	1.309
44	CPPED1 calcineurin-like phosphoesterase domain containing 1	1.289
45	VPS33B vacuolar protein sorting 33 homolog B (yeast)	1.287
46	VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1	1.270
47	H1F0 H1 histone family member 0	1.265
48	P3H2 prolyl 3-hydroxylase 2	1.249
49	FBXO38 F-box protein 38	1.239
50	OAT ornithine aminotransferase	1.231
51	CFTR cystic fibrosis transmembrane conductance regulator	1.180
52	LMTK2 lemur tyrosine kinase 2	1.152
53	WBP5 WW domain binding protein 5	1.140
54	LSM8 LSM8 homolog, U6 small nuclear RNA associated	1.124
55	ECHDC1 ethylmalonyl-CoA decarboxylase 1	1.086
56	PI4K2A phosphatidylinositol 4-kinase type 2 alpha	1.079
57	BCL7B B-cell CLL/lymphoma 7B	1.065
58	PDE8A phosphodiesterase 8A	1.046
59	GPRC5A G protein-coupled receptor, class C, group 5, member A	1.041
60	APBB1 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	1.037
61	OXTR oxytocin receptor	1.035
62	ZSCAN25 zinc finger and SCAN domain containing 25	1.021
63	EOGT EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase	1.016
64	PCED1B PC-esterase domain containing 1B	1.014
65	TGFB1I1 transforming growth factor beta 1 induced transcript 1	1.010

Rank	GO Acc. and Desc.	p-value
1	GO:0045901 positive regulation of translational elongation	3.510e-3
1	GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress	3.510e-3
1	GO:1902037 negative regulation of hematopoietic stem cell differentiation	3.510e-3
1	GO:1902161 positive regulation of cyclic nucleotide-gated ion channel activity	3.510e-3
1	GO:1902943 positive regulation of voltage-gated chloride channel activity	3.510e-3
1	GO:0072434 signal transduction involved in mitotic G2 DNA damage checkpoint	3.510e-3
1	GO:0070889 platelet alpha granule organization	3.510e-3
1	GO:0023057 negative regulation of signaling	3.510e-3
9	GO:0006412 translation	5.285e-3
10	GO:0097694 establishment of RNA localization to telomere	7.008e-3
10	GO:2000825 positive regulation of androgen receptor activity	7.008e-3
10	GO:1904884 positive regulation of telomerase catalytic core complex assembly	7.008e-3
10	GO:1904358 positive regulation of telomere maintenance via telomere lengthening	7.008e-3
10	GO:0071500 cellular response to nitrosative stress	7.008e-3
10	GO:0034970 histone H3-R2 methylation	7.008e-3
10	GO:0032963 collagen metabolic process	7.008e-3
10	GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	7.008e-3
10	GO:0019511 peptidyl-proline hydroxylation	7.008e-3
19	GO:0010467 gene expression	9.990e-3
20	GO:1902035 positive regulation of hematopoietic stem cell proliferation	1.049e-2
20	GO:0051972 regulation of telomerase activity	1.049e-2
20	GO:0070537 histone H2A K63-linked deubiquitination	1.049e-2
20	GO:0032066 nucleolus to nucleoplasm transport	1.049e-2
24	GO:0038127 ERBB signaling pathway	1.397e-2
24	GO:0036003 positive regulation of transcription from RNA polymerase II promoter in response to stress	1.397e-2
24	GO:0090240 positive regulation of histone H4 acetylation	1.397e-2
24	GO:0030579 ubiquitin-dependent SMAD protein catabolic process	1.397e-2
24	GO:0032400 melanosome localization	1.397e-2
24	GO:0034214 protein hexamerization	1.397e-2
24	GO:0033629 negative regulation of cell adhesion mediated by integrin	1.397e-2
31	GO:0036289 peptidyl-serine autophosphorylation	1.743e-2
31	GO:0035735 intraciliary transport involved in cilium morphogenesis	1.743e-2
31	GO:0061099 negative regulation of protein tyrosine kinase activity	1.743e-2
31	GO:0044829 positive regulation by host of viral genome replication	1.743e-2
31	GO:1904354 negative regulation of telomere capping	1.743e-2
31	GO:0090037 positive regulation of protein kinase C signaling	1.743e-2
31	GO:0030889 negative regulation of B cell proliferation	1.743e-2
31	GO:0007595 lactation	1.743e-2
39	GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	1.885e-2
40	GO:0006974 cellular response to DNA damage stimulus	1.904e-2
41	GO:0018105 peptidyl-serine phosphorylation	1.944e-2
42	GO:0060337 type I interferon signaling pathway	2.066e-2
43	GO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus	2.088e-2
43	GO:0052548 regulation of endopeptidase activity	2.088e-2
43	GO:0001881 receptor recycling	2.088e-2
43	GO:0031953 negative regulation of protein autophosphorylation	2.088e-2
43	GO:0032418 lysosome localization	2.088e-2
48	GO:0035456 response to interferon-beta	2.432e-2
48	GO:0043517 positive regulation of DNA damage response, signal transduction by p53 class mediator	2.432e-2
48	GO:0006975 DNA damage induced protein phosphorylation	2.432e-2
51	GO:0090399 replicative senescence	2.774e-2
51	GO:1902166 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator	2.774e-2
53	GO:0008543 fibroblast growth factor receptor signaling pathway	2.788e-2
54	GO:0035455 response to interferon-alpha	3.116e-2
54	GO:0046854 phosphatidylinositol phosphorylation	3.116e-2
54	GO:1904262 negative regulation of TORC1 signaling	3.116e-2
54	GO:0071480 cellular response to gamma radiation	3.116e-2
54	GO:0016571 histone methylation	3.116e-2
54	GO:0010944 negative regulation of transcription by competitive promoter binding	3.116e-2
60	GO:0045893 positive regulation of transcription, DNA-templated	3.155e-2
61	GO:0042511 positive regulation of tyrosine phosphorylation of Stat1 protein	3.456e-2
61	GO:2000353 positive regulation of endothelial cell apoptotic process	3.456e-2
61	GO:0007131 reciprocal meiotic recombination	3.456e-2
61	GO:0007094 mitotic spindle assembly checkpoint	3.456e-2
61	GO:0006309 apoptotic DNA fragmentation	3.456e-2
61	GO:0016578 histone deubiquitination	3.456e-2
67	GO:0006936 muscle contraction	3.518e-2
68	GO:1902476 chloride transmembrane transport	3.795e-2
68	GO:0006978 DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator	3.795e-2
68	GO:0032897 negative regulation of viral transcription	3.795e-2
68	GO:0007585 respiratory gaseous exchange	3.795e-2
72	GO:0043968 histone H2A acetylation	4.133e-2
72	GO:0007049 cell cycle	4.133e-2
74	GO:0042981 regulation of apoptotic process	4.315e-2
74	GO:0006260 DNA replication	4.315e-2
76	GO:0045444 fat cell differentiation	4.470e-2
77	GO:0007050 cell cycle arrest	4.736e-2
78	GO:2000134 negative regulation of G1/S transition of mitotic cell cycle	4.805e-2
78	GO:0071044 histone mRNA catabolic process	4.805e-2
78	GO:0030511 positive regulation of transforming growth factor beta receptor signaling pathway	4.805e-2

Rank	DO ID and Name	p-value
1	DOID:9446 cholangitis	2.441e-3
2	DOID:4074 pancreas adenocarcinoma	2.800e-3
3	DOID:0050144 Kartagener syndrome	7.008e-3
3	DOID:9829 drug abstinence syndrome or symptom	7.008e-3
3	DOID:8437 intestinal obstruction	7.008e-3
3	DOID:12639 pyloric stenosis	7.008e-3
7	DOID:2942 bronchiolitis	8.272e-3
8	DOID:3069 astrocytoma	8.278e-3
9	DOID:4993 atypical polypoid adenomyoma	1.049e-2
9	DOID:77 gastrointestinal system disease	1.049e-2
9	DOID:2609 adenomyoma	1.049e-2
12	DOID:14227 azoospermia	1.137e-2
13	DOID:1485 cystic fibrosis	1.192e-2
14	DOID:4943 adenocarcinoma In situ	1.397e-2
15	DOID:6741 bilateral breast cancer	1.743e-2
15	DOID:4036 Helicobacter pylori gastritis	1.743e-2
17	DOID:715 T-cell leukemia	1.826e-2
18	DOID:5870 eosinophilic pneumonia	2.088e-2
18	DOID:10127 cerebral artery occlusion	2.088e-2
18	DOID:2392 glandular cystitis	2.088e-2
21	DOID:418 systemic scleroderma	2.194e-2
22	DOID:12336 male infertility	2.650e-2
23	DOID:10574 vitamin D deficiency	2.774e-2
23	DOID:2757 Mycobacterium infectious disease	2.774e-2
23	DOID:1618 fibroadenoma of breast	2.774e-2
23	DOID:2693 fibroadenoma	2.774e-2
27	DOID:4451 renal carcinoma	2.858e-2
28	DOID:3030 mucinous adenocarcinoma	3.116e-2
28	DOID:2187 amelogenesis imperfecta	3.116e-2
28	DOID:3587 pancreatic ductal carcinoma	3.116e-2
31	DOID:552 pneumonia	3.442e-2
32	DOID:3454 brain infarction	3.456e-2
33	DOID:5223 infertility	3.542e-2
34	DOID:5616 intraepithelial neoplasm	3.595e-2
35	DOID:14681 Silver-Russell syndrome	3.795e-2
35	DOID:2717 bloom syndrome	3.795e-2
35	DOID:3437 laryngitis	3.795e-2
38	DOID:3347 osteosarcoma	3.898e-2
39	DOID:9562 primary ciliary dyskinesia	4.133e-2
40	DOID:841 extrinsic allergic alveolitis	4.470e-2
41	DOID:3498 pancreatic ductal adenocarcinoma	4.650e-2
42	DOID:9563 bronchiectasis	4.805e-2

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MeSH
excl. Neoplasms

MeSH
incl. Neoplasms

Rank	MeSH heading	links	Score
1	Epithelial Cells	8	16.39	View
1	Hydroxamic Acids	8	16.39	View
1	Azacitidine	8	16.39	View
1	Bronchi	8	16.39	View
5	T-Lymphocytes	4	6.62	View
6	Phenformin	3	6.35	View
6	Macrolides	3	6.35	View
8	Cisplatin	3	5.84	View
9	Calcium	3	5.02	View
9	Fibroblasts	3	5.02	View
9	Mitochondrial Diseases	3	5.02	View
12	Immune System Diseases	4	4.99	View
12	Th1 Cells	4	4.99	View
12	Th17 Cells	4	4.99	View
15	Sirolimus	2	3.56	View
16	Leukopenia	2	3.24	View
16	Mycobacterium Infections	2	3.24	View
16	Mycoses	2	3.24	View
16	Myelodysplastic Syndromes	2	3.24	View
16	Genetic Diseases, Inborn	2	3.24	View
16	Papillomavirus Infections	2	3.24	View

Rank	MeSH heading	links	Score
1	Breast Neoplasms	15	20.04	View
2	Azacitidine	8	16.39	View
2	Bronchi	8	16.39	View
2	Epithelial Cells	8	16.39	View
2	Hydroxamic Acids	8	16.39	View
6	Neoplasms	5	9.60	View
7	Melanoma	6	8.40	View
7	Skin Neoplasms	6	8.40	View
9	T-Lymphocytes	4	6.62	View
10	Phenformin	3	6.35	View
10	Macrolides	3	6.35	View
12	Cisplatin	3	5.84	View
12	Ovarian Neoplasms	3	5.84	View
14	Medulloblastoma	2	5.03	View
15	Calcium	3	5.02	View
15	Fibroblasts	3	5.02	View
15	Mitochondrial Diseases	3	5.02	View
18	Immune System Diseases	4	4.99	View
18	Th1 Cells	4	4.99	View
18	Th17 Cells	4	4.99	View
21	Blast Crisis	3	4.35	View
22	Adenocarcinoma	1	3.86	View
22	Carcinoma, Non-Small-Cell Lung	1	3.86	View
22	Lung Neoplasms	1	3.86	View
25	Precursor Cell Lymphoblastic Leukemia-Lymphoma	1	3.71	View
26	Sirolimus	2	3.56	View
27	Leukopenia	2	3.24	View
27	Mycobacterium Infections	2	3.24	View
27	Mycoses	2	3.24	View
27	Myelodysplastic Syndromes	2	3.24	View
27	Genetic Diseases, Inborn	2	3.24	View
27	Papillomavirus Infections	2	3.24	View
33	Cerebellar Neoplasms	2	3.08	View
34	Leukemia, Myeloid, Acute	2	3.07	View
35	Neoplasm Recurrence, Local	2	2.42	View
35	Leukemia, Myelomonocytic, Juvenile	2	2.42	View
37	Lymphatic Metastasis	1	1.93	View
37	Neoplasms, Experimental	1	1.93	View
37	Carcinoma, Large Cell	1	1.93	View
40	Multiple Myeloma	1	1.64	View
41	Leukemia, Lymphocytic, Chronic, B-Cell	1	1.35	View
42	Precursor B-Cell Lymphoblastic Leukemia-Lymphoma	1	1.34	View
43	Leukemia-Lymphoma, Adult T-Cell	1	1.29	View
43	Precursor T-Cell Lymphoblastic Leukemia-Lymphoma	1	1.29	View