Massive amount of array-based transcriptomics data have been deposited in several public depositories such as Gene Expression Omnibus (GEO) and ArrayExpress. Recent advance of sequencing technology has enabled platform-independent transcriptomic profiling via RNA-seq, which grows size of public transcriptomics data ever increasing rate. Data mining system to extract functional hypotheses from these transcriptomics big data sources will provide new routes to human disease research. Coexpedia is a database of context-associated co-expression networks inferred from individual series of microarray samples for human and mouse of GEO.
Coexpedia is distinctive co-expression databases by the following three aspects.
GEO Acc. | Title |
---|---|
GSE473 | PGA Human CD4+ Lymphocytes |
GSE635 | Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia. |
GSE643 | ASP sensitive all ALL |
GSE648 | VCR sensitive all ALL |
GSE649 | VCR resistant all ALL |
GSE650 | DNR sensitive all ALL |
GSE653 | ASP sensitive B-ALL |
GSE654 | ASP resistant B-ALL |
GSE655 | PRED sensitive B-ALL |
GSE657 | VCR sensitive B-ALL |
GSE658 | VCR resistant B-ALL |
GSE659 | DNR sensitive B-ALL |
GSE974 | Left ventricular apex samples |
GSE982 | Gene Expression-Based High Throughput Screening: HL-60 Cell Treatment with Candidate Compounds |
GSE1133 | tissue-specific pattern of mRNA expression |
GSE1420 | Barrett's esophagus, Barrett's-associated adenocarcinomas and normal esophageal epithelium |
GSE1456 | Gene expression of breast cancer tissue in a large population-based cohort of Swedish patients |
GSE1577 | T-ALL and T-lymphoblastic lymphoma |
GSE1729 | Gene expression profile of acute myeloid leukemia |
GSE2034 | Breast cancer relapse free survival |
GSE2113 | Plasma cell dyscrasias expression profiles associated with distinct IGH translocations in multiple myeloma |
GSE2280 | Prediction of lymphatic metastasis from primary squamous cell carcinoma of the oral cavity |
GSE2328 | Application of genome-wide expression analysis to human health & disease |
GSE2351 | chemotherapy cross-resistance and treatment response in childhood acute lymphoblastic leukemia |
GSE2842 | Additional systems to Prednisolone treated childhood ALL samples |
GSE3218 | Expression Profiling of Adult Male Germ Cell Tumors |
GSE3218 | Expression Profiling of Adult Male Germ Cell Tumors |
GSE3284 | A network-based analysis of systemic inflammation in humans |
GSE3284 | A network-based analysis of systemic inflammation in humans |
GSE3307 | Comparative profiling in 13 muscle disease groups |
GSE3307 | Comparative profiling in 13 muscle disease groups |
GSE3526 | Comparison of gene expression profiles across the normal human body |
GSE3911 | 60 samples obtained at relapse |
GSE4045 | Classification of serrated colorectal tumors |
GSE4127 | Anticancer drug clustering in lung cancer based on gene expression profiles and sensitivity database |
GSE4127 | Anticancer drug clustering in lung cancer based on gene expression profiles and sensitivity database |
GSE4183 | Inflammation, adenoma and cancer: objective classification of colon biopsy specimens with gene expression signature |
GSE4183 | Inflammation, adenoma and cancer: objective classification of colon biopsy specimens with gene expression signature |
GSE4271 | Molecular subclasses of high-grade glioma: prognosis, disease progression, and neurogenesis |
GSE4271 | Molecular subclasses of high-grade glioma: prognosis, disease progression, and neurogenesis |
GSE4475 | A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling |
GSE4475 | A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling |
GSE4885 | Role of coactivator SRC-1/NcoA-1 for IL-6 target gene induction in HepG2 cells |
GSE5090 | PCOS patients vs control subjects |
GSE5287 | Prediction of response and survival following chemotherapy in patients with advanced bladder cancer |
GSE5418 | Gene Expression Analysis in Malaria Infection |
GSE5462 | Letrozole (Femara) early response to treatment |
GSE5462 | Letrozole (Femara) early response to treatment |
GSE5580 | Cell Specific Expression & Pathway Analyses Reveal Novel Alterations in Trauma-Related Human T-Cell & Monocyte Pathways |
GSE5667 | Transcription data from Normal Skin and Nonlesional and Lesional Atopic Dermatitis/Eczema Skin |
GSE5667 | Transcription data from Normal Skin and Nonlesional and Lesional Atopic Dermatitis/Eczema Skin |
GSE5675 | Pilocytic astrocytoma |
GSE5787 | Survey of Intra- and Inter-Tumour Heterogeneity of Gene Expression in Cervical Cancer |
GSE5808 | Changes in PBMC Gene Expression During Acute Measles |
GSE5847 | Tumor and stroma from breast by LCM |
GSE5847 | Tumor and stroma from breast by LCM |
GSE6008 | Human ovarian tumors and normal ovaries |
GSE6008 | Human ovarian tumors and normal ovaries |
GSE6008 | Human ovarian tumors and normal ovaries |
GSE6011 | Expression data from quadriceps muscle of young DMD patients and age matched controls |
GSE6095 | Diagnosis of Acute Lung Rejection by Gene Expression Profiling of Bronchoalveolar Lavage Cells |
GSE6269 | Gene expression patterns in blood leukocytes discriminate patients with acute infections |
GSE6280 | Expression data for normal and tumor kidneys |
GSE6365 | Distinct transcriptional and genetic features associated with chromosome 13 deletion in multiple myeloma |
GSE6401 | Up-regulation of translational machinery and distinct genetic subgroups characterize hyperdiploidy in multiple myeloma |
GSE6477 | Expression data from different stages of plasma cell neoplasm |
GSE6477 | Expression data from different stages of plasma cell neoplasm |
GSE6596 | Comparison of gene expression data from human and mouse breast cancers: Identification of conserved breast tumor genes |
GSE6613 | Parkinson's disease vs. controls, whole blood |
GSE6740 | Comparison of transcriptional profiles of CD4+ and CD8+ T cells from HIV-infected pateints and uninfected control group |
GSE6764 | Genome-wide molecular profiles of HCV-induced dysplasia and hepatocellular carcinoma |
GSE6914 | Gene expression associated with gemcitabine resistance and its reversal by bexarotene |
GSE6956 | Tumor Immunobiological Differences in Prostate Cancer between African-American and European-American Men |
GSE7055 | Expression of microRNAs and Protein-coding Genes Associated with Perineural Invasion in Prostate Cancer |
GSE7127 | 63 Melanoma cell lines |
GSE7307 | Human body index - transcriptional profiling |
GSE7390 | Strong Time Dependence of the 76-Gene Prognostic Signature |
GSE7390 | Strong Time Dependence of the 76-Gene Prognostic Signature |
GSE7497 | Influence of TGFbeta on human resting CD4+ T cells |
GSE7638 | Expression data from monocytes of individuals with different collateral flow index CFI |
GSE7803 | Human pre-invasive and invasive cervical squamous cell carcinomas and normal cervical epithelia |
GSE7848 | Effect of actein on the growth of the MDA-MB-453 breast cancer cell lines as a function of time and concentration. |
GSE7894 | Differential gene expression in peripheral blood CD2+ leukocytes from PATH particpants |
GSE7895 | Reversible and Permanent effects of Tobacco Smoke Exposure on Airway Epithelial Gene Expression |
GSE7929 | Gene Signature for Aggression of Melanoma Metastases - Melanoma Metastasis (LeiATCC) |
GSE7956 | Gene Signature for Aggression of Melanoma Metastases - Melanoma Metastasis (LeiFidler) |
GSE8052 | Genetic variants regulating ORMDL3 expression are determinants of susceptibility to childhood asthma |
GSE8157 | Gene expression profiling in skeletal muscle of PCOS after pioglitazone therapy |
GSE8192 | The DExH-box RNA helicase RHAU is a Nuclear Protein Involved in Transcription and mRNA Decay |
GSE8218 | Gene expression data from prostate cancer samples |
GSE8218 | Gene expression data from prostate cancer samples |
GSE8332 | Death receptor O-glycosylation controls tumor-cell sensitivity to the proapoptotic ligand Apo2L/TRAIL |
GSE8397 | Expression profiling of the Parkinsonian Brain |
GSE8440 | Expression data fromCongenital disorders of Glycosylation type-1 patients (CDG-I) |
GSE8481 | Various human cell types |
GSE8581 | Human Chronic Obstructive Pulmonary Disorder (COPD) Biomarker |
GSE8650 | Blood Leukocyte Microarrays to Diagnose Systemic Onset Juvenile Idiopathic Arthritis and Follow IL-1 blocade |
GSE8658 | PPARg regulated gene expression in human dendritic cells |
GSE8658 | PPARg regulated gene expression in human dendritic cells |
GSE8658 | PPARg regulated gene expression in human dendritic cells |
GSE8835 | Chronic lymphocytic leukemia cells induce changes in gene expression of CD4 and CD8 T cells. |
GSE8921 | Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response |
GSE9006 | Gene expression in PBMCs from children with diabetes |
GSE9103 | Skeletal Muscle Transcript Profiles in Trained or Sedentary Young and Old Subjects |
GSE9166 | Trovafloxacin-Induced Gene Expression Changes: Comparison of Primary Human Hepatocytes to HepG2 Cells |
GSE9169 | Gene expression during neuronal differentiation in two subtypes of SH-SY5Y |
GSE9195 | Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen |
GSE9195 | Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen |
GSE9419 | The skeletal muscle transcript profile reflects responses to inadequate protein intake in younger and older males |
GSE9476 | Abnormal Expression Changes in AML |
GSE9676 | Effects of sex and age on skeletal muscle gene expression in normal men and women |
GSE9844 | Transcriptomic Dissection of Tongue Squamous Cell Carcinoma |
GSE9874 | Expression profiles of human macrophages |
GSE9891 | Expression profile of 285 ovarian tumour samples |
GSE9936 | Expression data from human breast cancer cells (MCF-7) coexpressing ERalpha and Erbeta, treated with phytoestrogens |
GSE9971 | CYP3A5 Gene Expression is Associated with Early Recurrence of Non-small Cell Lung Cancer |
GSE10063 | Effects of tobacco smoke on gene expression and cellular pathways in a cellular model of oral leukoplakia |
GSE10172 | Molecular profiling of pediatric mature B-cell lymphoma treated in population-based prospective clinical trials |
GSE10172 | Molecular profiling of pediatric mature B-cell lymphoma treated in population-based prospective clinical trials |
GSE10282 | In-transit extremity melanoma I |
GSE10325 | Expression data from human peripheral blood subsets |
GSE10325 | Expression data from human peripheral blood subsets |
GSE10327 | mRNA expression data of 62 human medulloblastoma tumors |
GSE10327 | mRNA expression data of 62 human medulloblastoma tumors |
GSE10358 | Discovery and validation of expression data for the Genomics of Acute Myeloid Leukemia Program at Washington University |
GSE10410 | Triazole Antifungal Toxicogenomics: human_primary_hepatocytes_CellzDirect |
GSE10445 | MERLION LUNG CANCER STUDY |
GSE10445 | MERLION LUNG CANCER STUDY |
GSE10474 | Microarray Analysis of Acute Lung Injury |
GSE10592 | Differential gene expression from azithromycin and SMM treated human airway epithelium |
GSE10792 | Genome wide genotyping and gene expression data of childhood B-cell precursor ALL without known genetic aberrations |
GSE10843 | mRNA Cancer Cell Line Profiles |
GSE10846 | Prediction of survival in diffuse large B cell lymphoma treated with chemotherapy plus Rituximab |
GSE10846 | Prediction of survival in diffuse large B cell lymphoma treated with chemotherapy plus Rituximab |
GSE10911 | Expression data from MCF-7aro aromatase inhibitor-resistant, tamoxifen-resistant and LTEDaro lines. |
GSE10911 | Expression data from MCF-7aro aromatase inhibitor-resistant, tamoxifen-resistant and LTEDaro lines. |
GSE11083 | Childhood Onset Rheumatic Disease Gene Expression Profile |
GSE11166 | Local regulation and clinical impact of complement gene expression in deceased and living donor kidney allografts |
GSE11190 | Interferon signaling and treatment outcome in chronic hepatitis C |
GSE11318 | Molecular subtypes of DLBCL have distinct chromosomal aberrations |
GSE11342 | Gene expression of Peg-interferon alfa-2b plus ribavirin in hepatitis C patients during the first 10 weeks of treatment |
GSE11482 | Rhabdoid Tumor: Gene Expression Clues to Pathogenesis and Potential Therapeutic Targets |
GSE11869 | The genomic response of a human uterine endometrial adenocarcinoma cell line to 17alpha-ethynyl estradiol. |
GSE11869 | The genomic response of a human uterine endometrial adenocarcinoma cell line to 17alpha-ethynyl estradiol. |
GSE11877 | Children's Oncology Group Study 9906 for High-Risk Pediatric ALL |
GSE11877 | Children's Oncology Group Study 9906 for High-Risk Pediatric ALL |
GSE11903 | Effective treatment of psoriasis with etanercept is linked to suppression of IL17 signaling, not immediate response TNF |
GSE11917 | Vitamin D sterol effects on coronary ASMC genes |
GSE12079 | Molecular profiling of CD3- CD4+ T-cells from patients with the lymphocytic variant of hypereosinophilic syndrome |
GSE12093 | The 76-gene Signature Defines High-Risk Patients that Benefit from Adjuvant Tamoxifen Therapy |
GSE12102 | Overcoming resistance to conventional drugs in Ewing's sarcoma and identification of molecular predictors of outcome. |
GSE12172 | Common activation of RAS_MAPK pathway in serous LMP tumours |
GSE12195 | Mutations of multiple genes deregulate the NF-kB pathway in diffuse large B cell lymphoma |
GSE12195 | Mutations of multiple genes deregulate the NF-kB pathway in diffuse large B cell lymphoma |
GSE12195 | Mutations of multiple genes deregulate the NF-kB pathway in diffuse large B cell lymphoma |
GSE12195 | Mutations of multiple genes deregulate the NF-kB pathway in diffuse large B cell lymphoma |
GSE12195 | Mutations of multiple genes deregulate the NF-kB pathway in diffuse large B cell lymphoma |
GSE12237 | Genes that mediate breast cancer metastasis to the brain |
GSE12288 | Gene expression patterns in peripheral blood correlate with the extent of coronary artery disease |
GSE12355 | Detection of Notch1-IC, Notch2-IC and EBNA2 target genes in human B cells |
GSE12408 | Defective Cohesin in CdLS Mediates Gene Expression with Characteristics of Transcription Factor and Insulator Activity |
GSE12408 | Defective Cohesin in CdLS Mediates Gene Expression with Characteristics of Transcription Factor and Insulator Activity |
GSE12417 | Prognostic gene signature for normal karyotype AML |
GSE12460 | Expression profiling of neuroblastic tumors |
GSE12627 | Non-supervised hierarchical clustering of gene expression data |
GSE12662 | Normal human bone marrow CD34+ cells, promyelocytes, and neutrophils and PR9 cell line PML-RARA induction time course |
GSE12667 | Discovery of somatic mutations in lung adenocarcinomas |
GSE12777 | Gene expression profiling of 51 human breast cancer cell lines |
GSE12777 | Gene expression profiling of 51 human breast cancer cell lines |
GSE12868 | ChIP-on-chip significance analysis reveals large-scale binding and regulation by human transcription factor oncogenes |
GSE12939 | Global gene expression changes including drug metabolism and disposition induced by three-dimensional culture of HepG2 |
GSE12992 | Beta-catenin status in pediatric medulloblastomas |
GSE12995 | Expression data for diagnosis acute lymphoblastic leukemia samples |
GSE13009 | MCF7 EGF, HRG stimulation |
GSE13009 | MCF7 EGF, HRG stimulation |
GSE13041 | Gene expression analysis of glioblastomas identifies the major molecular basis for the prognostic benefit of younger age |
GSE13294 | Expression data from primary colorectal cancers |
GSE13314 | Gene expression profiling of pulmonary MALT lymphoma |
GSE13351 | Expression data from ALL samples for patients included in the Dutch Childhood Oncology Group |
GSE13351 | Expression data from ALL samples for patients included in the Dutch Childhood Oncology Group |
GSE13351 | Expression data from ALL samples for patients included in the Dutch Childhood Oncology Group |
GSE13355 | Gene expression data of skin from psoriatic patients and normal controls |
GSE13355 | Gene expression data of skin from psoriatic patients and normal controls |
GSE13367 | Genome-wide gene expression analysis of mucosal colonic biopsies and isolated colonocytes... |
GSE13425 | Expression data from ALL patients included in the set used to construct a classification signature (COALL cohort) |
GSE13506 | Galanin preproprotein is associated with elevated plasma triglycerides |
GSE13548 | Expression data from human cancer cells treated with UPR modulators under ER stress conditions |
GSE13591 | Integrated genomics approach to detect allelic imbalances in multiple myeloma |
GSE13760 | Gene expression profiling in arterial tissue from type 2 diabetic patients |
GSE13760 | Gene expression profiling in arterial tissue from type 2 diabetic patients |
GSE13811 | Analysis of gene expression response of CLL cells to co-culture with Nurse like cells |
GSE13911 | Expression data from primary gastric tumors (MSI and MSS) and adjacent normal samples |
GSE13933 | Trachea Epithelium as a "Canary" for Cigarette Smoking-induced Biologic Phenotype of Small Airway Epithelium |
GSE13996 | Molecular profiling of classical Hodgkin's lymphoma tissues |
GSE14018 | Metastases of breast cancer (U133A) |
GSE14018 | Metastases of breast cancer (U133A) |
GSE14034 | Alterations in Gene Expression in Human Mesothelial Cells Correlate with Mineral Pathogenicity |
GSE14062 | MLL rearrangements in pediatric ALL and AML: MLL specific and lineage specific signatures |
GSE14209 | Dysregulated genes associated with acquired resistance |
GSE14315 | Effects of demethylation on lung cancer cell lines |
GSE14323 | RMA expression data for liver samples from subjects with HCV, HCV-HCC, or normal liver |
GSE14333 | Expression data from 290 primary colorectal cancers |
GSE14383 | Effects of chronic exposure of human bronchial epithelial cells to low doses of cigarette smoke condensate |
GSE14615 | Microarray analyses of induction failure in T-ALL (COG study 9404) |
GSE14615 | Microarray analyses of induction failure in T-ALL (COG study 9404) |
GSE14671 | EXPRESSION SIGNATURE TO PREDICT MAJOR CYTOGENETIC RESPONSE IN CHRONIC PHASE CML PATIENTS TREATED WITH IMATINIB |
GSE14671 | EXPRESSION SIGNATURE TO PREDICT MAJOR CYTOGENETIC RESPONSE IN CHRONIC PHASE CML PATIENTS TREATED WITH IMATINIB |
GSE14805 | Transcript expression data from glioblastoma subcutaneous xenografts and non-neoplastic control brain |
GSE14828 | FGF-2 ENHANCES PROLIFERATION AND DELAYS LOSS OF CHONDROGENIC POTENTIAL IN HUMAN ADULT BONE MARROW-DERIVED MSCs |
GSE14858 | Gene exprssion profile classification predicts clinical outcome in juvenile myelomonocytic leukemia |
GSE14880 | Differentation in neuroblastomas |
GSE14905 | Type I Interferon: Potential Therapeutic Target for Psoriasis? |
GSE14924 | Characterisation of gene expression changes in T cells from patients presenting with AML compared with healthy T cells |
GSE14926 | Analysis of the impact of the method of cell selection on the gene expression profile of human CD4 and CD8 T cells |
GSE14934 | Gene expression profiles of Ras mutants. |
GSE14994 | Patterns of gene expression and copy-number alterations in VHL disease-associated and sporadic ccRCC |
GSE15258 | Whole blood transcript profiling of rheumatoid arthritis patients |
GSE15434 | Gene expression profiling in AML with normal karyotype: A multicenter study investigating molecular markers in 251 cases |
GSE15471 | Whole-Tissue Gene Expression Study of Pancreatic Ductal Adenocarcinoma |
GSE15490 | Sequential gene expression profiling in CLL during treatment |
GSE15641 | Gene signatures of progression and metastasis in renal cell cancer |
GSE15695 | Comprehensive Homozygous Deletion Mapping of Myeloma Defines a Poor Prognosis Cell Death Gene Expression Signature |
GSE15695 | Comprehensive Homozygous Deletion Mapping of Myeloma Defines a Poor Prognosis Cell Death Gene Expression Signature |
GSE15695 | Comprehensive Homozygous Deletion Mapping of Myeloma Defines a Poor Prognosis Cell Death Gene Expression Signature |
GSE15765 | Identification of cholangiocarcinoma-like gene expression traits in hepatocellular carcinoma |
GSE15765 | Identification of cholangiocarcinoma-like gene expression traits in hepatocellular carcinoma |
GSE15777 | Spontaneous regression of chronic lymphocytic leukemia: clinical and biological features of 9 cases |
GSE15913 | Thalidomide Exerts Distinct Molecular Antileukemic Effects |
GSE15935 | Expression data from 'naive' and HVC-replicon containing Huh7 cells (Clone A cells) |
GSE16015 | AML with mutated NPM1 carrying a normal or aberrant karyotype show overlapping features |
GSE16020 | Patients affected with autosomal dominant monocytopenia with increased susceptibility to mycobacterial infection |
GSE16059 | Gene Expression in Peripheral Blood Leucocytes in Monozygotic Twins Discordant for Chronic Fatigue |
GSE16129 | Enhanced Monocyte Response & Decreased Central Memory T Cells in Children with Invasive Staphylococcus aureus Infections |
GSE16131 | Differences Between Follicular Lymphoma With and Without Translocation t(14;18) |
GSE16214 | Expression data from relapsing-remitting MS samples |
GSE16214 | Expression data from relapsing-remitting MS samples |
GSE16214 | Expression data from relapsing-remitting MS samples |
GSE16237 | Expression data of human neuroblastoma tissue samples |
GSE16391 | GGI: a potential predictor of relapse for endocrine-treated breast cancer patients in the BIG 1-98 trial |
GSE16476 | Integrated bioinformatic and wet-lab approach to identify potential oncogenic networks in neuroblastoma |
GSE16476 | Integrated bioinformatic and wet-lab approach to identify potential oncogenic networks in neuroblastoma |
GSE16476 | Integrated bioinformatic and wet-lab approach to identify potential oncogenic networks in neuroblastoma |
GSE16476 | Integrated bioinformatic and wet-lab approach to identify potential oncogenic networks in neuroblastoma |
GSE16515 | Expression data from Mayo Clinic Pancreatic Tumor and Normal samples |
GSE16581 | Genomic landscape of meningiomas: gene expression |
GSE16677 | Gene expression profiling of Down Syndrome (DS)-AMKL and non-DS AMKL samples |
GSE17025 | Gene Expression Analysis of Stage I Endometrial Cancers |
GSE17032 | Expression data from human fibroblasts |
GSE17183 | Hepatic gene expression before and during interferon and ribavirin combination therapy |
GSE17195 | Germline genomic variations associated with childhood acute lymphoblastic leukemia |
GSE17306 | Plasma cells from 52 patients with multiple myeloma: mRNA and miRNA expression profiling |
GSE17356 | Expression data from prostate cancer epithelial cells from African American and European American men |
GSE17459 | Down's syndrome with acute lymphoblastic pediatric leukemia (DS-ALL) |
GSE17475 | Expression data from lung adenocarcinoma |
GSE17536 | Metastasis Gene Expression Profile Predicts Recurrence and Death in Colon Cancer Patients (Moffitt Samples) |
GSE17536 | Metastasis Gene Expression Profile Predicts Recurrence and Death in Colon Cancer Patients (Moffitt Samples) |
GSE17700 | Factorial study for evaluating the effect of Affy platform and lab on gene expression measurements |
GSE17703 | Bone marrow gene expression of pediatric acute lymphoblastic leukemia (ALL) |
GSE17800 | Myocardial gene expression profiles and cardiodepressant autoantibodies predict response of patients with dilated cardiomyopathy to immunoadsorption therapy |
GSE17855 | Expression data from pediatric AML patients |
GSE17855 | Expression data from pediatric AML patients |
GSE17920 | Expression data of diagnostic biopsy samples from Hodgkin lymphoma patients |
GSE17951 | Gene expression analysis of prostate cancer samples using Affymetrix U133Plus2 array |
GSE17951 | Gene expression analysis of prostate cancer samples using Affymetrix U133Plus2 array |
GSE17967 | RMA expression data for liver samples from subjects with HCV cirrhosis with and without concomitant HCC |
GSE18005 | Human colorectal cancer cell lines treated with several inhibitors of PI3Kinase - AKT signaling pathway |
GSE18018 | Multilineage dysplasia and AML with mutated nucleophosmin |
GSE18088 | Correlation of molecular profiles and clinical outcome of stage UICC II colon cancer patients |
GSE18206 | Analysis of human in vivo irritated epidermis: differential profiles induced by sodium lauryl sulphate and nonanoic acid |
GSE18323 | Expression data from a malaria vaccine trial (HG-U133A2.0 and U133 Plus 2.0) |
GSE18497 | Diagnosis-relapse in ALL |
GSE18670 | Pancreatic cancer circulating tumor cells express a cell motility gene signature that predicts survival after surgery |
GSE18674 | Gene expression profile of Human tissues and cells |
GSE18723 | Gene Expression Circulating B Lymphocytes for Smoking Females |
GSE18791 | Antiviral response dictated by choreographed cascade of transcription factors |
GSE18842 | Gene expression analysis of human lung cancer and control samples |
GSE18995 | Expression data from donor lungs of cardiac death and brain death donors |
GSE19143 | Gene expression data from children diagnosed with ALL in vitro sensitive or resistant to prednisolone |
GSE19147 | CD3+ T-cells of B-cell chronic lymphocytic leukemia |
GSE19188 | Expression data for early stage NSCLC |
GSE19234 | Immune profile and mitotic index of metastatic melanoma lesions enhance clinical staging in predicting patient survival. |
GSE19246 | A novel method of amplification of FFPET derived-RNA enables accurate disease classification with microarrays |
GSE19301 | Gene Expression Patterns in Peripheral Blood Mononuclear Cells Associated with Asthma Exacerbation Attack |
GSE19314 | Sarcoidosis-specific markers from whole blood gene expression |
GSE19314 | Sarcoidosis-specific markers from whole blood gene expression |
GSE19475 | Gene expression data from infants (<1 year of age) diagnosed with Acute Lymphoblastic Leukemia (ALL) |
GSE19475 | Gene expression data from infants (<1 year of age) diagnosed with Acute Lymphoblastic Leukemia (ALL) |
GSE19475 | Gene expression data from infants (<1 year of age) diagnosed with Acute Lymphoblastic Leukemia (ALL) |
GSE19475 | Gene expression data from infants (<1 year of age) diagnosed with Acute Lymphoblastic Leukemia (ALL) |
GSE19577 | MLL partner genes confer distinct biological and clinical signatures of pediatric AML, an AIEOP study |
GSE19804 | Genome-wide screening of transcriptional modulation in non-smoking female lung cancer in Taiwan |
GSE20181 | Letrozole (Femara) early and late responses to treatment |
GSE20181 | Letrozole (Femara) early and late responses to treatment |
GSE20196 | Gene expression profile of poorly differentiated synovial sarcoma |
GSE20559 | Gene expression signature reflects differentiation differences rather than telomere maintenance mechanism |
GSE20711 | Epigenetic portraits of human breast cancers (expression data) |
GSE20910 | Expression data from Down syndrome and non-Down syndrome pediatric acute lymphoblastic leukemia cases |
GSE21029 | The lymph node microenvironment promotes B-cell receptor signaling, NF-κB activation, and tumor proliferation in chronic lymphocytic leukemia (CLL) |
GSE21122 | Whole-transcript expression data for soft-tissue sarcoma tumors and control normal fat specimens |
GSE21452 | Integrated genomic profiling in mantle cell lymphoma |
GSE21477 | Gene Expression Changes in Primary Human Nasal Epithelial Cells exposed to Formaldehyde in vitro |
GSE21589 | The Relationship between Virus Replication and Host Gene Expression in Lymphatic Tissue during HIV-1 Infection |
GSE21610 | Gene expression analysis in non-failing and failing myocardium pre and post pulsatile and non-pulsatile VAD support |
GSE22056 | High VEGFC expression is associated with unique gene expression profiles and predicts adverse prognosis in pediatric and adult acute myeloid leukemia. |
GSE22083 | Expression data from human skin exposed to solar-simulated radiation with or without sunscreen |
GSE22224 | Comparative Transcriptional and Phenotypic Peripheral Blood Analysis of Kidney Recipients under Cyclosporin A or Sirolimus Monotherapy |
GSE22356 | Altered immune phenotype in peripheral blood cells of patients with scleroderma-associated pulmonary hypertension |
GSE22470 | Translocations Activating IRF4 Identify a Subtype of Germinal-Center-Derived B-cell Lymphoma Affecting Predominantly Children and Young Adults |
GSE22470 | Translocations Activating IRF4 Identify a Subtype of Germinal-Center-Derived B-cell Lymphoma Affecting Predominantly Children and Young Adults |
GSE22470 | Translocations Activating IRF4 Identify a Subtype of Germinal-Center-Derived B-cell Lymphoma Affecting Predominantly Children and Young Adults |
GSE22541 | Expression data from pulmonary metastases and primary tumors of clear-cell renal cell carcinoma (ccRCC) with different disease-free survivals |
GSE22573 | Organotpyic Human Epithelial Neoplasia |
GSE22707 | Absence of significant overlap in transcriptional patterns between operationallytolerant liver and kidney recipients |
GSE22762 | An eight-gene expression signature for the prediction of survival and time to treatment in chronic lymphocytic leukemia |
GSE22762 | An eight-gene expression signature for the prediction of survival and time to treatment in chronic lymphocytic leukemia |
GSE22762 | An eight-gene expression signature for the prediction of survival and time to treatment in chronic lymphocytic leukemia |
GSE22886 | Expression profiles from a variety of resting and activated human immune cells |
GSE23038 | Normal prostate cells were immortalized and cultured for 650 days till several transformation hallmarks were observed |
GSE23038 | Normal prostate cells were immortalized and cultured for 650 days till several transformation hallmarks were observed |
GSE23120 | Basal gene expression data from Human Variation Panel |
GSE23120 | Basal gene expression data from Human Variation Panel |
GSE23120 | Basal gene expression data from Human Variation Panel |
GSE23120 | Basal gene expression data from Human Variation Panel |
GSE23120 | Basal gene expression data from Human Variation Panel |
GSE23120 | Basal gene expression data from Human Variation Panel |
GSE23120 | Basal gene expression data from Human Variation Panel |
GSE23293 | Definition and characterization of the systemic T cell dysregulation in untreated indolent B cell lymphoma and very early CLL |
GSE23553 | Gene expression changes with induction of in-vitro platinum-resistance in ovarian cancer cell lines. |
GSE23806 | Expression data of glioblastoma stem-like (GS) cell lines, conventional glioma cell lines and primary tumors |
GSE23806 | Expression data of glioblastoma stem-like (GS) cell lines, conventional glioma cell lines and primary tumors |
GSE23806 | Expression data of glioblastoma stem-like (GS) cell lines, conventional glioma cell lines and primary tumors |
GSE23988 | Expression data from breast cancer FNA biopsies from patients (US samples) |
GSE24187 | Atorvastatin, rosuvastatin and rifampicin effect on human primary hepatocyte transcriptome [Affymetrix platform] |
GSE24427 | Expression data of multiple sclerosis patients receiving subcutaneous Interferon-beta-1b therapy [U133 A and B] |
GSE24427 | Expression data of multiple sclerosis patients receiving subcutaneous Interferon-beta-1b therapy [U133 A and B] |
GSE24514 | Expression data from human MSI colorectal cancer and normal colonic mucosa |
GSE24742 | Effects of Rituximab on global gene expression profiles in the RA synovium |
GSE24870 | Gene expression profiling of CD34+ subsets in Multiple Myeloma and healthy individuals |
GSE25429 | Gene expression profiles of primary cultured ovarian cells and ovarian cancer cell lines in the presence and absence of a DNA methyltransferase inhibitor |
GSE25550 | t(11;18)-positive vs. t(11;18)-negative MALT lymphoma |
GSE25550 | t(11;18)-positive vs. t(11;18)-negative MALT lymphoma |
GSE25571 | Expression analysis of genes located in the minimally deleted regions of 13q14 and 11q22-23 in chronic lymphocytic leukemia - unexpected expression pattern of the RHO GTPase activator ARHGAP20 |
GSE25613 | A Novel Pro-Survival Function of Cyclin-D1 Underlies Its Oncogenic Role and Potential as a Therapeutic Target in Human and Murine Mantle Cell Lymphoma |
GSE25941 | Effects of age on the skeletal muscle transcriptome |
GSE26281 | Integrated Genetic and Epigenetic Analysis of Childhood Acute Lymphoblastic Leukemia Reveals a Synergistic Role for Structural and Epigenetic Lesions In Determining Disease Phenotype |
GSE26344 | In vitro models of glioblastoma (GBM) |
GSE26366 | Notch/HES1-mediated PARP1 activation: A cell-type specific mechanism for tumor suppression |
GSE26511 | Involvement of the TGF-β and β-catenin pathways in pelvic lymph node metastasis in early stage cervical cancer |
GSE26549 | Gene Expression Profiling Predicts the Development of Oral Cancer |
GSE26622 | MOLECULAR CHARACTERIZATION OF LIVER ALLOGRAFTS FROM OPERATIONALLY TOLERANT TRANSPLANT RECIPIENTS (Affymetrix) |
GSE26682 | MRE11 Deficiency Increases Sensitivity to Poly(ADP-ribose) Polymerase Inhibition in Microsatellite Unstable Colorectal Cancers. |
GSE26682 | MRE11 Deficiency Increases Sensitivity to Poly(ADP-ribose) Polymerase Inhibition in Microsatellite Unstable Colorectal Cancers. |
GSE26682 | MRE11 Deficiency Increases Sensitivity to Poly(ADP-ribose) Polymerase Inhibition in Microsatellite Unstable Colorectal Cancers. |
GSE26713 | Integrated transcript and genome analyses reveal NKX2-1 and MEF2C as potential oncogenes in T-ALL |
GSE26869 | Regulation of myogenic progenitor proliferation in human fetal skeletal muscle by BMP4 and its antagonist Gremlin. |
GSE26886 | Gene expression profiling of Barrett's esophagus, adenocarcinoma, esophageal squamous epithelium and squamous cell carcinoma |
GSE26971 | Affymetrix data for training of Endopredict algorithm |
GSE27041 | OXPHOS complex I deficiency leads to transcriptional changes of the Nrf2-Keap1 pathway and selenoproteins. |
GSE27155 | Human thyroid adenomas, carcinomas, and normals |
GSE27155 | Human thyroid adenomas, carcinomas, and normals |
GSE27263 | Assessment of genotoxic effects and changes in gene expression in humans exposed to formaldehyde by inhalation under controlled conditions |
GSE27389 | Substitutions in the KRas oncogene determine protein behavior: Implications for signaling and clinical outcome. |
GSE27651 | The Anterior Gradient Homolog 3 (AGR3) Gene Is Associated with Differentiation and Survival in Ovarian Cancer |
GSE28044 | Expression data from non-malignant fallopian tube epithelium |
GSE28392 | Effects of resistance exercise on the transcriptome in MHC I and MHC IIa muscle fibers of young and old women |
GSE28497 | New markers for minimal residual disease detection in acute lymphoblastic leukemia |
GSE28571 | Gene Copy Number Aberrations are Associated with Survival in Histological Subgroups of Non-Small Cell Lung Cancer (expression data) |
GSE28691 | Characterization of an Oxaliplatin Sensitivity Predictor in a preclinical Murine Model of Colorectal Cancer |
GSE28702 | CRC samples for FOLFOX therapy prediction |
GSE28796 | Gene expression profiles of pretreatment biopsies from dose-dense-docetaxel-treated breast cancers |
GSE28821 | Laser-capture microdissected invasive micropapillary carcinomas of the breast |
GSE28995 | THP-1 cell study: RA and TNF Treatments; RA time course |
GSE29001 | Identification of Unique Therapeutic Targets in Esophageal Squamous Cell Carcinoma |
GSE29023 | Predict cytogenetic abnormalities with gene expression profiles |
GSE29175 | Expression data from ovarian cancer cell lines |
GSE29354 | Mesothelioma tumor gene expression profiles |
GSE29570 | The mtDNA Amerindian Haplogroup B2 enhances the risk for Cervical Cancer of HPV: de-regulation of mitochondrial genes may be involved. |
GSE29683 | Coexpression of Normally Incompatible Developmental Pathways in Retinoblastoma Genesis [human tumor/cell line data] |
GSE29718 | An early inflammatory gene profile in visceral adipose tissue in children |
GSE29721 | The landscape of promoter DNA hypomethylation in liver cancer (expression data) |
GSE29908 | Expression data from peripheral blood mononuclear cell in patients with type 1 diabetes before and after peripheral stem cell transplantation |
GSE29986 | gene expression analyses of pediatriclymphoblastic lymphomas and leukemias |
GSE30074 | Expression data from 30 medulloblastomas |
GSE30161 | Genomic Multivariate Predictors of Response to Adjuvant Chemotherapy in Ovarian Carcinoma: Predicting Platinum Resistance |
GSE30240 | Expression data from 5 human cell lines exposed to IR (5 Gy) |
GSE30442 | Whole-exome sequencing identifies mutations of BCOR in acute myeloid leukemia with normal karyotype |
GSE30723 | Gene Expression Profiles of human primary alveolar type II (ATII) cells and macrophages (AMs) after influenza virus infection |
GSE30784 | Gene expression profiling of oral squamous cell carcinoma (OSCC) |
GSE30903 | Expression data from untreated and ATP treated AML blasts |
GSE30929 | Whole-transcript expression data for liposarcoma |
GSE30979 | Gene expression in hypoxic non-small cell lung cancer |
GSE31312 | Development and application of a new immunophenotypic algorithm for molecular subtype classification of Diffuse Large B-Cell Lymphoma (DLBCL): Report from an International DLBCL Rituximab-CHOP Consortium Program Study |
GSE31312 | Development and application of a new immunophenotypic algorithm for molecular subtype classification of Diffuse Large B-Cell Lymphoma (DLBCL): Report from an International DLBCL Rituximab-CHOP Consortium Program Study |
GSE31312 | Development and application of a new immunophenotypic algorithm for molecular subtype classification of Diffuse Large B-Cell Lymphoma (DLBCL): Report from an International DLBCL Rituximab-CHOP Consortium Program Study |
GSE31312 | Development and application of a new immunophenotypic algorithm for molecular subtype classification of Diffuse Large B-Cell Lymphoma (DLBCL): Report from an International DLBCL Rituximab-CHOP Consortium Program Study |
GSE31312 | Development and application of a new immunophenotypic algorithm for molecular subtype classification of Diffuse Large B-Cell Lymphoma (DLBCL): Report from an International DLBCL Rituximab-CHOP Consortium Program Study |
GSE31312 | Development and application of a new immunophenotypic algorithm for molecular subtype classification of Diffuse Large B-Cell Lymphoma (DLBCL): Report from an International DLBCL Rituximab-CHOP Consortium Program Study |
GSE31348 | Tuberculosis Patients Blood Gene Expression Through Treatment |
GSE31403 | Clinically Relevant Subsets Identified by Gene Expression Patterns Support a Revised Ontogenic Model of Wilms Tumor: A Children's Oncology Group Study |
GSE31504 | Impact of Gene Expression Profiling Based Risk Stratification in Patients with Myeloma Receiving Initial Therapy with Lenalidomide and Dexamethasone |
GSE31534 | Gene expression profile in A375 melanoma cells after 45 functionally important molecules were knocked down using siRNA |
GSE31620 | MicroRNA-1 is a candidate tumor suppressor and prognostic marker |
GSE31684 | Combination of a novel gene expression signature with a clinical nomogram improves the prediction of survival in high-risk bladder cancer |
GSE31684 | Combination of a novel gene expression signature with a clinical nomogram improves the prediction of survival in high-risk bladder cancer |
GSE31773 | Comparison of mRNA expression in circulating T-cells from patients with severe asthma |
GSE31912 | Gene expression profile in MCF7 breast cancer cells after 78 functionallly important molecules were knocked down using siRNA. |
GSE32448 | CPDR tumor-benign 80 genechip dataset |
GSE32474 | Comparison between cell lines from 9 different cancer tissue (NCI-60) (Affymetrix U133 Plus 2.0) |
GSE32474 | Comparison between cell lines from 9 different cancer tissue (NCI-60) (Affymetrix U133 Plus 2.0) |
GSE32607 | Human lymphocyte activation during the G0 to G1 transition |
GSE32646 | GSTP1 expression predicts poor pathological complete response to neoadjuvant chemotherapy in ER-negative breast cancer |
GSE32901 | Expression data for effector T cells |
GSE32962 | In vitro prednisolone resistance signature in MLL-rearranged infant ALL |
GSE33109 | Gene expression changes in human neural cells exposed to VX (O-ethyl S-[2-(diisopropylamino)ethyl] methylphosphonothiolate) |
GSE33113 | AMC colon cancer AJCCII |
GSE33113 | AMC colon cancer AJCCII |
GSE33458 | Gene expression analysis of osteosarcoma tumor-initiating cells (High) vs bulk tumor cells (Low) |
GSE34171 | Integrative Analysis of a series of newly diagnosed Diffuse Large B-cell Lymphomas (DLBCLs) |
GSE34171 | Integrative Analysis of a series of newly diagnosed Diffuse Large B-cell Lymphomas (DLBCLs) |
GSE34205 | Transcriptional profile of PBMCs in patients with acute RSV or Influenza infection |
GSE34211 | Pfizer Molecular Profile Data for Cell Lines |
GSE34211 | Pfizer Molecular Profile Data for Cell Lines |
GSE34607 | Airborne particulate matter affects gene expression in BEAS-2B bronchial epithelial cells. |
GSE34620 | Expression profiling of Ewing sarcoma samples |
GSE34670 | Gene expression in pediatric cALL |
GSE34733 | Methylation of the Proximal, Distal and Core Promoter of CEBPA in 572 Cases with Normal Karyotpye AML and 44 with t(8;21) Disclosed Different Frequencies but no Impact on Prognosis |
GSE34860 | Gene expression profiling in acute myeloid leukemia with mutated NPM |
GSE35287 | Unique Transcriptome, Pathways, and Networks in the Human Endometrial Fibroblast Response to Progesterone in Endometriosis |
GSE35493 | Pediatric rhabdoid tumors of kidney and brain show many differences in gene expression but share dysregulation of cell cycle and epigenetic effector genes |
GSE35896 | Gene expression data from 62 colorectal cancers |
GSE36245 | Gene expression data from glioblastoma tumor samples |
GSE36701 | Gene expression analysis of rectal mucosa in chronic irritable bowel syndrome (IBS) compared to healthy volunteers (HV) |
GSE36771 | Expression data from primary breast tumors (Auckland) |
GSE36772 | Expression data from primary breast tumors (NUH) |
GSE36773 | Expression data from primary breast tumors (IJB+OXF) |
GSE36824 | Clonal competition with alternating dominance in multiple myeloma [GEP] |
GSE36824 | Clonal competition with alternating dominance in multiple myeloma [GEP] |
GSE36895 | Molecular Genetic Classification of clear-cell Renal Cell Carcinoma (ccRCC) based on the Gene Expression Profiling of Tumors and Tumorgrafts deficient for BAP1 or PBRM1 |
GSE37088 | Follicular Lymphoma expression array |
GSE37200 | Gene expression profiling of Barrett's esophageal tissues and esophageal adenocarcinoma specimens |
GSE37201 | Gene expression profiling of esophageal adenocarcinoma |
GSE37307 | Aberrant expressed genes in AML |
GSE37364 | Expression data from human colonic biopsy samples(adenoma-carcinoma) |
GSE37371 | Expression data from Ewing's sarcoma tumor samples |
GSE37418 | Novel mutations target distinct subgroups of medulloblastoma. |
GSE37567 | Methodoligies for identifying lead toxicity |
GSE38351 | The multifaceted balance of TNF-a and type I / II interferon responses in SLE and RA: how monocytes manage the impact of cytokines |
GSE38351 | The multifaceted balance of TNF-a and type I / II interferon responses in SLE and RA: how monocytes manage the impact of cytokines |
GSE38627 | Thalidomide in Total Therapy 2 Overcomes Inferior Prognosis of Myeloma with Low Expression of the Glucocorticoid Receptor Gene NR3C1 |
GSE38885 | Expression data from post-transplant lymphoproliferative disorder (PTLD) patient samples |
GSE39088 | Down-regulation of Interferon signature in systemic lupus erythematosus patients by active immunization with Interferon alpha-Kinoid |
GSE39204 | Gene-expression profiles of ascites-cytology-positive ovarian cancer |
GSE39411 | Expression data from healthy and malignant (chronic lymphocytic leukemia, CLL) human B-lymphocytes after B-cell receptor stimulation |
GSE39454 | Genomic signatures characterize leukocyte infiltration in myositis muscles |
GSE39612 | Distinct gene expression profiles of viral- and non-viral associated Merkel cell carcinoma revealed by transcriptome analysis |
GSE39671 | Expression data from untreated CLL patients |
GSE39976 | Determination of molecular markers for BRCA1 and BRCA2 heterozygosity using gene expression profiling |
GSE40182 | Culturing Cytotrophoblasts Reverses Gene Dysregulation in Preeclampsia Revealing Possible Causes |
GSE40231 | The Stockholm Atherosclerosis Gene Expression (STAGE) study: Global Gene Expression data from coronary and carotid artery disease patients |
GSE40263 | Novel antioxidative peptides with potential to reduce psoriatic changes in PBMCs |
GSE41445 | Basal gene expression data of 21 cell lines (18 cancer and 3 non-tumorigenic) |
GSE42203 | Global expression analysis of DLBCL and SMZL cell lines |
GSE42743 | Oral Cavity Cancer Compared to Adjacent Normal Tissue [Validation Set] |
GSE42816 | Gene expression propionic patients, carriers, and controls |
GSE42822 | Expression data from breast cancer FNA biopsies from patients ( (USO samples) |
GSE43290 | Expression data from meningiomas and normal meninges |
GSE43553 | Microarray-based gene expression profiling in patients with cryopyrin-associated periodic syndromes defines a disease-related signature and IL-1-responsive transcripts. |
GEO Acc. | Title |
---|---|
GSE1471 | Cardiac muscle, comparisons of wild type and mdx mice, 8 week and 10.5 month (Porter lab) |
GSE1479 | C57BL/6 Benchmark Set for Early Cardiac Development |
GSE3100 | Cystic Fibrosis Mouse Lung Profiles |
GSE3184 | Murine Airway Hyperresponsiveness |
GSE3203 | Influenza virus infection-induced gene expression changes of regional B cells are mediated in part through type I IFN |
GSE3414 | Immune Response to Nippostrongylus brasiliensis in the mouse lung |
GSE5037 | zhang-affy-mouse-217286 |
GSE5130 | Accurate and precise transcriptional profiles from 50 pg of total RNA or 100 flow-sorted primary lymphocytes |
GSE5394 | Gene Expression after Cochlear Removal in Cochlear Nucleus at P7 and P21 |
GSE5657 | Effect of X-linked hypophosphatemia (the Hyp mutation) on gene expression in the mid-shaft of the mouse femur |
GSE6453 | Expression microarray analysis of pubertal mouse mammary gland development |
GSE6509 | Gene Profile of RU486 effect on LPS induced gene expression in CNS. |
GSE7487 | Gene profiling of pathological cardiac hypertrophy vs physiological hypertrophy |
GSE7536 | Microarray expression profiling of discrete microdissected mouse inner ear tissues from E9 to E15 at half-day intervals. |
GSE7798 | Osteoclastic estrogen receptor alpha mediates the osteoprotective estrogen action through Fas ligand signaling |
GSE8396 | Effect of Synthetic Dietary Triglycerides: a Novel Research Paradigm for Nutrigenomics |
GSE8512 | Expression data from mouse bone marrow macrophages from a strain intercross |
GSE8836 | CLL in Em-TCL1 mice provides a biologically relevant model to unravel and reverse immune deficiency in human cancer. |
GSE8949 | Gene expression changes in mouse aorta during activation of or interference with PPAR gamma signaling. |
GSE9355 | Microarray expression profiles of mammary tumors developed in Wap-Cre;Etv6-NTRK3 mice |
GSE9371 | Estrogen receptors alpha and beta mediation of gene expression in mouse vascular tissue |
GSE9533 | PPARalpha-mediated effects of dietary lipids on intestinal barrier gene expression |
GSE9563 | Translation state array analysis of Mouse embryonic stem cells and embryoid bodies |
GSE9785 | Expression data from Newborn mice infected with Shigella flexneri |
GSE9954 | Large-scale analysis of the mouse transcriptome |
GSE9975 | newly transcribed RNA (nt-RNA) for IFN alpha and gamma time course |
GSE10246 | GNF Mouse GeneAtlas V3 |
GSE10493 | Novartis 12 Strain Diet Sex Survey |
GSE10627 | Mll-AF9 induced changes in gene expression in various hematopoietic cells |
GSE10744 | Copy number variation and gene expression in the mouse |
GSE11056 | Expression data from mouse lung |
GSE11494 | Innate immune response of murine nasal-associated lymphoid tissue (NALT) to Streptococcus pyogenes infection. |
GSE11662 | GADD45a in ventilator-induced lung injury: role of Akt signaling |
GSE11796 | ligand-activated and -unactivated AHR in wiltype and mutant hepatoma cells |
GSE12413 | Prediction of left ventricle systolic dysfunction in mice using gene expression profiling |
GSE12420 | Gene profiling of heart atria in PI3K and Mst1 mouse models |
GSE12730 | Mouse gestational protein restriction: Newborn offspring liver and hindleg muscle |
GSE12905 | Foxl2 functions in sex determination and histogenesis throughout mouse ovary development, analyzed by Affymetrix arrays |
GSE13302 | Gene expression profiling in the lung and liver of Perfluorooctane sulfonate (PFOS) exposed mouse fetuses |
GSE13379 | Application of a translational profiling approach for the comparative analysis of CNS cell types. |
GSE13443 | Induction of systemic disease-specific salivary biomarker profiles in mouse cancer models |
GSE13522 | Transcriptional response in skin of mouse 24 hours after intradermal infection with Trypanosoma cruzi |
GSE13873 | Expression data from murine gastric epithelium |
GSE14350 | IL-2 dependent genes of T regulatory and T effector cells |
GSE14499 | Effect of BDNF on the APP transgenic mouse model of Alzheimer's disease |
GSE14539 | Chronic liver inflammation-induced double strand DNA breaks enhance hepatocarcinogenesis |
GSE14810 | Microarray data from murine C3H/10T1/2 and 3T3 L1 adipocytes |
GSE14917 | C/EBPa is required for pulmonary cytoprotection from hyperoxia injury |
GSE14929 | Myocardial expression data from gnotobiotic wild-type and Ppara-/- mice |
GSE15129 | Coenzyme Q10-dependent gene expression in SAMP1 mice tissues |
GSE15401 | Expression data from mouse aorta during and following transient hyperglycaemia |
GSE15729 | Gene Expression of ApoE Null and ApoE Null/RAGE Diabetic and Non-diabetic Mice |
GSE15907 | Immunological Genome Project data Phase 1 |
GSE16012 | Gene expression profiles in Elastin (Eln+/-) mouse aorta and aortic valve tissue |
GSE16361 | Gene expression profiling of muscles from transgenic humanSODG93A mice at symptomatic stage |
GSE16496 | Expression profile of adult mouse 51 CNS regions |
GSE16585 | Expression profiling of P14 and P28 mouse retina from 4 genotypes: +/+, Rorb-/- , +/+;CrxpNrl and Rorb-/-;CrxpNrl |
GSE16902 | Expression data from mouse gastric tumor models |
GSE16994 | Microarray analysis of iris gene expression in mice with mutations influencing pigmentation |
GSE17110 | Gene expression data from P. gingivalis infected Mouse |
GSE17438 | Transcriptional profiling of 77 tissue samples from germ-free and conventionally raised mice. |
GSE17478 | Particulate Matter effect on Mouse Model of Cardiac Failure: Lung and Heart Left Ventricle |
GSE17509 | Reduced levels of protein tyrosine phosphatase CD45 protect mice from the lethal effects of Ebola virus infection |
GSE17825 | Murine fracture healing |
GSE17864 | mRNA profiling reveals divergent roles of PPARa and PPARß/d in regulating mouse liver gene expression (PPARb/d samples) |
GSE18216 | Non-targeted effects of low dose ionizing radiation act via TGFβ to promote mammary carcinogenesis |
GSE18460 | Lactobacillus acidophilus induces virus immune defense genes in murine dendritic cells by a TLR-2 dependent mechanism |
GSE18614 | Differential Regulation of Mitogen-Activated Protein Kinases by Acetaminophen in TAMH cells |
GSE18740 | Luteolin has anti-inflammatory and neurotrophic effects on microglia |
GSE18858 | Transcriptional Biomarkers to Predict Female Mouse Liver Tumors in Rodent Cancer Bioassays - A 26 Chemical Set |
GSE18859 | Gene expression in the colon of DSS-treated Pglyrp1-/-, Pglyrp2-/-, Pglyrp3-/-, and Pglyrp4-/- mice |
GSE18896 | ERRγ Regulates Cardiac, Gastric and Renal Potassium Homeostasis |
GSE19137 | Interferon response genes as immunopathogenic correlates of SARS coronavirus infection in mice (129/S6/SvEv) |
GSE19322 | Expression data from C57BL/6J and MRL/MpJ hearts following acute myocardial infarction |
GSE19401 | Expression data from murine follicular dendritic cells |
GSE19499 | Expression data from mouseT-cell lymphomas |
GSE19675 | Negative regulation of the IFN/STAT signaling pathway by the Trim24 tumor suppressor protein through Rara inhibition |
GSE19793 | MyD88-mediated signaling prevents development of adenocarcinomas of the colon via interleukin-18 |
GSE19855 | Molecular Characterization of Treponema denticola infection-induced bone and soft tissue transcriptional profiles |
GSE20389 | Molecular Characterization of Tannerella forsythia infection-induced bone and soft tissue transcriptional profiles |
GSE20465 | Her2/Neu breast cancer mouse model whole tissue transcriptome |
GSE20547 | A53T-α-synuclein overexpression mouse model signaling and striatal synaptic plasticity |
GSE20614 | Gene expression profiling of mouse tumors arising from Keratin 6-positive mammary cells |
GSE20621 | Immunoregulatory actions of epithelial cell PPAR g at the colonic mucosa |
GSE20684 | The gene encoding the hematopoietic stem cell regulator CCN3 (NOV) is under direct cytokine control through the transcription factors STAT5a/b. |
GSE21263 | Network Analysis of Skin Tumor Progression Identifies a Rewired Genetic Architecture Affecting Inflammation and Tumor Susceptibility (papillomas) |
GSE21419 | Laser Capture Microdissection of Hyperlipidemic Mouse Aorta Atherosclerosis |
GSE21716 | Hepatic xenobiotic metabolizing enzyme gene expression through the life stages of the mouse |
GSE22006 | Medulloblastoma tumors derived from Ptch+/-p53-/- transgenic mouse allografted in nude mice |
GSE22215 | Early and Late gene expression responses to Salmonella infection in the mouse intestine |
GSE22307 | Expression data from mouse colon tissue response to DSS induction at day 0, 2, 4 and 6 |
GSE22506 | Unacylated Ghrelin Rapidly Modulates Lipogenic and Insulin Signaling Pathway Gene Expression in Metabolically Active Tissues of GHSR Deleted Mice |
GSE22871 | Expression data from wild-type and PPARalpha-null mice exposed to perfluorooctane sulfonate (PFOS) |
GSE22873 | Ager (Rage) and Myd88 deletion in resected mouse livers |
GSE23006 | Transcriptional profiling of awound healing process in skin and oral mucosa |
GSE23009 | Effect of intra-cytoplasmic sperm injection (ICSI) on gene expression and development of mouse preimplantation embryos |
GSE23182 | Systemic inflammation modulates Fc receptor expression on microglia in chronic neurodegeneration |
GSE23408 | Global gene expression profiles and the progression of pro- and anti-inflammatory pathways in mouse models |
GSE23780 | A Novel Statistical Algorithm for Gene Expression Analysis Differentiates PXR-Dependent and Independent Mechanisms of Toxicity |
GSE23938 | Comprehensive genomic profiling identified miRNA signatures associated with mammary tumor differentiation and development |
GSE24207 | mRNA analysis in different mouse tissues |
GSE24594 | MMTV-Myc tumor development in E2F-null backgrounds |
GSE24637 | Genetic and genomic analysis of hyperlipidemia, obesity and diabetes using TALLYHO x C57BL6 F2 mice |
GSE24773 | Expression data from WT, Crebbp+/- and Ep300+/- bone marrow stroma |
GSE24873 | IL-17-induced NF-kB activation via CIKS/Act1: Physiologic significance and signaling mechanisms |
GSE24920 | Gene Expression in Myotonic Dystrophy |
GSE25029 | Ionizing radiation in GI tract of Tweak KO mice |
GSE25098 | Rhabdomyosarcoma can be initiated in activated Pax7+ Muscle Progenitor Cells |
GSE25123 | PPARg and IL-4-induced gene expression data from PPARg +/- LysCre and PPARg fl/- LysCre mouse bone marrow-derived macrophages |
GSE25306 | Gene expression profiling of skeletal muscles treated with a soluble activin type IIB receptor |
GSE25313 | Effect of PDE4 inhibition on host gene expression of Mtb-infected mouse lungs. |
GSE25488 | Expression data from C3(1)Tag mammary tumors, tumor derived cell line (M6) and normal mammary tissue (FVB) |
GSE25908 | Distinct Protein Degradation Induced by Different Disuse Models of Skeletal Muscle Atrophy |
GSE26147 | Examination of inflammatory transcripts during a transfer model of type I diabetes. |
GSE26299 | Gene expression profiling in DBA/2J glaucoma |
GSE26464 | High Fat Diet Reduces the Expression of Glutathione Peroxidase 3 in Mouse Prostate |
GSE26475 | Microarray expression data from whole murine knee joints at early time points post surgery in the destabilization of medial meniscus (DMM) model of OA |
GSE26671 | Expression data of murine model of cardiac hypertrophy |
GSE26830 | Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells (mRNA) |
GSE27149 | Expression data from murine vaginal samples following adjuvant treatment |
GSE27546 | Effects of HMGN variants on cellular transcription profile |
GSE27715 | Gene expression profiles of germ cells, supporting cells, interstitial cells (including steroidogenic precursors), and endothelial cells in the developing testis and ovary at 11.5, 12.5, and 13.5 dpc. (GUDMAP Series ID: 43) |
GSE28559 | An expression microarray approach for the identification of candidate metastable epialleles in the mouse genome |
GSE29164 | IL-12 induces myeloid cells in situ to cross-present antigen |
GSE29285 | C/EBPa Regulates Protease/anti-protease Balance and Mediates Bronchiolar Cell Recovery After Injury |
GSE29632 | Effect of Nrf2 deletion in postnatal lung development and BPD phenotype in newborn mice |
GSE29670 | Polymicrobial periodontal pathogens transcriptomes in calvarial bone and soft tissue |
GSE29685 | Coexpression of Normally Incompatible Developmental Pathways in Retinoblastoma Genesis [mouse model data] |
GSE29897 | Long non-coding RNAs regulate adipogenesis (Affymetrix) |
GSE30457 | Dissecting primary (translation independent) from secondary (translation dependent) IFN-mediated differential gene expression |
GSE30971 | The Histone Methyltransferase Wbp7 Controls Macrophage Function through GPI Glycolipid Anchor Synthesis. [Expression Profile] |
GSE31115 | Transcriptional profiling of 53 tissue samples from germ-free and conventionally raised mice |
GSE31372 | Misprocessing of APP and accumulation of β-Amyloid causes early alteration of pathways implicated in late-onset Alzheimer disease. |
GSE31409 | Lentiviral vector-based insertional mutagenesis identifies new clinically relevant cancer genes involved in the pathogenesis of hepatocellular carcinoma |
GSE31561 | Transcriptional analysis of organ-specific toxicity induced by a panPPAR agonist in mice: Identification of organ-specific toxicity biomarkers |
GSE31995 | Gene Expression data from Mouse Balb/c Bone marrow derived macrophages infected by the promastigote form of Leishmania major parasite (P) or Killed parasite (Kp) during a time course of infection [Balb/c] |
GSE31996 | Gene Expression data from Mouse C57bl6 Bone marrow derived macrophages infected by the promastigote form of Leishmania major parasite (P) or Killed parasite (Kp) during a time course of infection [C57bl6] |
GSE32316 | FGFR1 target genes in brown adipose tissues |
GSE32423 | Expression data from naive and memory CD8 T cells cultured in presence or absence of IL-4 |
GSE32500 | Whole Genome Expression after Hypoxia andReoxygenation in the Newborn Mouse Lung, Brain and Eye |
GSE32706 | Comparative transcriptomics and metabolomic analysis of fenofibrate and fish oil treatments in mice |
GSE32994 | Oct4 and jhdm1b infected MEF with or without vitamin C treatment |
GSE33085 | Transcriptome analysis of adult retina cell types. |
GSE33199 | A mouse model of the most aggressive subgroup of human medulloblastoma [Mouse430_2] |
GSE33549 | Expression data from mouse T-cell lymphomas |
GSE33726 | The circadian clock coordinates ribosome biogenesis. |
GSE33744 | Cross-species transcriptional networks in Diabetic Glomerulopathy in mouse and man |
GSE33931 | Expression data from mouse muscle |
GSE34071 | Expression data of Normal versus Mutant MPS VII C3H mouse |
GSE34078 | Global gene expression profiling in mouse plasma cell tumor precursor and bystander cells revels potential intervention targets for plasma-cell neoplasia |
GSE34723 | Gene Expression Commons: an open platform for absolute gene expression profiling |
GSE34773 | Skeletal muscle PGC-1a mediates mitochondrial, but not metabolic, changes during calorie restriction. |
GSE35077 | A gene expression database for retinal neuron subtypes |
GSE35243 | Expression data from embryonic mouse pleuroperitoneal folds and diaphragms |
GSE36074 | Differential regulation of extracellular matrix constituents in myocardial remodeling with and without heart failure following pressure overload |
GSE36806 | Chronic TNBS Colitis in the FN14 KO Mouse |
GSE36826 | Neutrophil-derived IL-1β is sufficient for abscess formation in immunity against Staphylococcus aureus in mice |
GSE36838 | Expression profiling of the effect of high-fat diet, low-fat diet, CR and exercise on mice liver |
GSE36888 | Critical Role of STAT5 Transcription Factor Tetramerization for Cytokine Responses and Normal Immune Function (RNA) |
GSE37000 | The transcriptional landscape of hematopoietic stem cell ontogeny |
GSE38048 | E2F1 loss induces spontaneous tumour development in Rb-deficient epidermis |
GSE38093 | Diet-Induced Obesity Exacerbates Inflammatory and Oxidative Stress Responses in Mice Exposed to Cigarette Smoke |
GSE38574 | Gene expression data from Ldlr-/-, Apob100/100, Mttp flox/flox Mx1-Cre mice at different stages of atherosclerosis development |
GSE38754 | Temporal changes of gene expression in mouse heart, kidney and lung during juvenile growth |
GSE38826 | Cooperative and antagonistic roles for Irx3 and Irx5 in cardiac morphogenesis and postnatal physiology |
GSE38952 | Expression data from AJ and C3H mouse lungs exposed to NNK |
GSE39304 | Double-stranded RNA induces molecular and inflammatory signatures that are directly relevant to COPD |
GSE39562 | Immortalized clonal brown, beige and white adipose cell lines |
GSE40151 | Bleomycin induces molecular changes directly relevant to idiopathic pulmonary fibrosis:A model for “active†disease. |
GSE40439 | Gene expression analysis of Ncor1 muscle-specific knockout and PGC-1alpha muscle-specific transgenic skeletal muscle |
GSE40609 | Murine PDAC cell lines |
GSE40610 | Expression data from a Charcot-Marie-Tooth 1B neuropathy mouse model |
GSE40758 | Transgenic Eµ-myc mouse lymphoma expression data for test dataset [Mouse430A_2] |
GSE40857 | Expression data from mouse optic nerve head after optic nerve crush |
GSE41438 | Gestational Age-Dependent Changes in Gene Expression of Metabolic Enzymes and Transporters in Pregnant Mice |
GSE41768 | PTP1B deficiency effect on mammary gland development and differentiation |
GSE42264 | Hsp70 and a Novel Axis of Type 1 Interferon-Dependent Antiviral Immunity in the Measles Virus-Infected Brain |
GSE42533 | Her2/Neu tumorigenesis and metastasis is regulated by E2F transcription factors |
GSE42742 | Murine microenvironment metaprofiles associate with human cancer etiology and intrinsic subtypes |
GSE42858 | Progesterone receptor-dependent gene signatures in the mouse mammary gland after acute progesterone treatment |
GSE42892 | Microarray Analysis of a Familial Hypertrophic Cardiomyopathy Mouse Model Rescued by a Phospholamban Knockout |
GSE43155 | Expression profiling of wildtype mouse cornea in development, adult, and aging |
GSE43373 | Molecular and cellular response profiles induced by the TLR4 agonist-based adjuvant Glucopyranosyl Lipid A |
GSE43775 | Induction of the mouse germ cell fate by transcription factors in vitro [exp1] |
GSE43961 | Xist RNA is a potent suppressor of hematologic cancer in mice. |
GSE43969 | Reconstruction of the dynamic regulatory network that controls Th17 cell differentiation by systematic perturbation in primary cells (Affymetrix timecourse IL23 KO) |
GSE44387 | Transcriptomal profiling of C57BL/6 wild type and ER-alpha KO mice fetal mammary gland after fetal exposure to Bisphenol A (BPA) and 17alpha-ethynylestradiol (EE2) |
GSE45051 | Gene expression profile of liver from adult and neonatal Balb/c mice after listeriosis |
GSE45365 | Genome-wide expression study of the early/innate responses of murine B and T cells to MCMV infection |
GSE45465 | Dynamic changes in liver 5-hydroxymethylcytosine profiles upon non-genotoxic carcinogen exposure [Replicated control vs. pb treated study] |
GSE45514 | Treatment of established mouse AA with topical JAK inhibitors |
GSE45551 | Prevention of Mouse AA with IL-15 pathway inhibitors |
GSE45577 | Profiling of glycerol- and CTX-induced models of muscle regeneration in mice |
GSE45592 | Dicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex [array] |
GSE46109 | Dynamic Gene Expression Response to TGF-β Stimulation in Multipotent Progenitors and Common Dendritic Cell Progenitors |
GSE46209 | Non-telomeric role for Rap1 in regulating metabolism and protecting against obesity |
GSE46298 | Whole genome transcriptome analysis identifies indices of fast and slow disease progression in two ALS mouse models |
GSE46568 | Expression data from mouse liver tissue from SKH:QS mice treated with 68ZnO sunscreens |
GSE46606 | Transcriptional regulation of germinal center B and plasma cell fates by dynamical control of IRF4 (expression) |
GSE46889 | Temporal Gene Expression Patterns in the skin of D6 null and wild type mice after inflammation with the chemical irritant TPA |
GSE47546 | Gene expression in whole lung and pulmonary macrophages reflects the dynamic pathology associated with airway surface dehydration [left lobe only] |
GSE47550 | mRNA expression data from whole trachea dissected from either wild-type mice or Scnn1b-Tg mice at post-natal days 0, 3, 10, and 42 |
GSE48564 | Expression data from mammary tumors from a MOLF/Ei x PyMT mouse cross |
GSE48565 | Expression data from mammary tumors from a Diversity Outcross x PyMT mouse cross |
GSE49383 | Gene expression data from mouse HDAC4 KO pups, postnatal day 3 |
GSE50250 | Expression data from vessels of differing embryonic origin |
GSE50400 | Suppression of molecular inflammatory pathways by Toll-like Receptor 7, 8, and 9 antagonists in a model of IL-23-induced skin inflammation |
GSE50517 | Shp2 Signaling Suppresses Senescence in PyMT-induced Mammary Gland Cancer in Mice [Mouse430_2 array] |
GSE50789 | Gene expression in mouse liver in response to short-term calorie restriction |
GSE50794 | GEMM CRC collection analysis |
GSE51080 | Expression data from exposure of BAT and WAT at 6 and 28 degrees C |
GSE51285 | Expression and Metabolic Profiles in a Panel of Five Neural Tube Defect Mouse Models |
GSE51414 | Expression data from oxaliplatin-treated tumors from mice pre-treated or not with antibiotics cocktail |
GSE51432 | β-Cryptoxanthin suppresses inflammatory gene expression in diet-induced nonalcoholic steatohepatitis in mice |
GSE51483 | Transcriptional Atlas of Cardiogenesis Maps Congenital Heart Disease Interactome |
GSE51885 | Liver mRNA microarray study for mice treated with various diets |
GSE52333 | Circadian Liver Gene Expression in Animals on Normal Chow or High Fat Diet |
GSE52474 | Late Multiple Organ Surge in Interferon-regulated Target Genes Characterizes Staphylococcal Enterotoxin B Lethality |
GSE53131 | Expression data from livers of C57BL/6J mice fed a high-fat diet and coffee |
GSE53307 | Expression data from multiple mouse adipose depots |
GSE53607 | Bioinformatics Multivariate Analysis Determined a Set of Phase-Specific Biomarker Candidates in a Novel Mouse Model for Viral Myocarditis |
GSE54147 | Pregnancy-associated alterations in DNA methylation patterns of mammary epithelial stem cells [reproductive stages] |
GSE54217 | Calcineurin signaling regulates neural induction through antagonizing the BMP pathway |
GSE54498 | Effect of Dot1l deletion on LSKs and GMPs |
GSE54582 | Transcriptomic analysis of mammary tumors from MMTV-ErbB2 transgenic mice |
GSE54597 | Dose-response modeling of early molecular and cellular key events in CAR-mediated hepatocarcinogenesis pathway |
GSE54650 | A circadian gene expression atlas in mammals assayed by microarray |
GSE55084 | Mouse liver transcription profiling by array |
GSE55746 | Transcriptional profiling of liver from wild type and PXR-null mice treated with PCN |
GSE55756 | Transcription profiling of mouse liver by array |
GSE57034 | BAC-trap studies of Purkinje cells in normal and FMR1 mutant mice |
GSE58244 | Role of Notch receptors in ozone induced lung injury in mice |
GSE58484 | Expression data from mus musculus subjected to traumatic brain injury (TBI) for treatment with cyclophosphamide |
GSE58915 | Changes of genes in time-dependent photoaged mouse model |
GSE59336 | Identification of odorant receptors activated by odorants in vivo |
GSE59422 | Effect of Hypertension of Dendritic Cell Gene Expression |
GSE59437 | Expression data from mouse tissue Angiotensin II treated for 0,1,3,7days |
GSE59560 | Molecular profiling of three tumor subtypes in Ptch medulloblastomas |
GSE60088 | Transcriptional Profilingin Sepsis-induced Experimental Multiple Organ Dysfunction Syndrome |
GSE60149 | Global hepatic transcript data from fasted male BXD strains on chow or high fat diet |
GSE60780 | Gene expression profiling in mice overexpressing human wild type (WT) keratin 8 (K8) or K8 variants (G62C and R341H). |
GSE60856 | Expression data of isolated motor neurons from SOD1 G93A mice, after G-CSF treatment |
GSE61847 | Inflammatory profile of NOD.Batf3-/- islets |
GSE61937 | Neuron-specific deletion of the miRNA-processing enzyme DICER induces severe but transient obesity in mice |
GSE62635 | Transcriptional responses of mouse adipocytes during insulin resistance |
GSE63027 | Expression data from GNMT and MAT1A knockout models that develop all the stages of non-alcoholic fatty liver disease including hepatocellular carcinoma [GNMT_MAT1A_3&8_months] |
GSE64522 | Expression data from mammary tumors from a generation 7 Diversity Outcross x PyMT cross |
GSE65888 | In vivo electroporation-based conditional oncogenic activation implicates multiple distinct cellular origins for Group3 medulloblastoma |
COEXPEDIA: exploring biomedical hypotheses via co-expressions associated with medical subject headings (MeSH). Nucleic Acids Res., Volume 45, Issue D1, 4 Jan. 2017, Pages D389-D396.
PMID: 27679477
DOI: 10.1093/nar/gkw868
Insuk Lee (insuklee (at) yonsei.ac.kr)
This project was supported by the National Research Foundation of Korea grant
(2012M3A9B4028641, 2012M3A9C7050151, 2015R1A2A1A15055859).